Lesson Objectives
- Identify general mechanisms that regulate gene expression.
- Describe how gene regulation occurs in prokaryotes.
- Give an overview of gene regulation in eukaryotes.
WORKBOOK ASSIGNMENT:
Chapter 7.4 workbook pages
Get the workbook here: https://guesthollow.com/store/free-high-school-biology-workbook/
Vocabulary
- gene expression
- use of a gene to make a protein
- homeobox gene
- gene that codes regulatory proteins that control gene expression during development
- operator
- a region of an operon where regulatory proteins bind
- operon
- region of prokaryotic DNA that consists of a promoter, an operator, and one or more genes that encode proteins needed for a specific function
- regulatory element
- region of DNA where a regulatory protein binds
- regulatory protein
- protein that regulates gene expression
- TATA box
- regulatory element that is part of the promoter of most eukaryotic genes
Introduction
Each of your cells has at least 20,000 genes. In fact, all of your cells have the same genes. Do all of your cells make the same proteins? Nope! If they did, then all your cells would be alike (and you’d be a blob that couldn’t do anything except, well, be a blob). Instead, you have cells with different structures and functions. This is because different cells make different proteins. They do this by using, or expressing, different genes. Using a gene to make a protein is called gene expression.
Go ahead and be expressive! Your genes are!
How Gene Expression is Regulated
Gene expression is regulated to ensure that the correct proteins are made when and where they are needed. Regulation may occur at any point in the expression of a gene, from the start of transcription to the processing of a protein after translation. The focus in this lesson is the regulation of transcription. As shown in Figure below, transcription is controlled by regulatory proteins. The proteins bind to regions of DNA, called regulatory elements, which are located near promoters. After regulatory proteins bind to regulatory elements, they can interact with RNA polymerase, the enzyme that transcribes DNA to mRNA. Regulatory proteins are typically either activators or repressors.
- Activators promote transcription by enhancing the interaction of RNA polymerase with the promoter.
- Repressors prevent transcription by impeding the progress of RNA polymerase along the DNA strand.
Other factors may also be involved in the regulation of transcription, but these are typically the key players.

Regulation of Transcription. Regulatory proteins bind to regulatory elements to control transcription. The regulatory elements are embedded within the DNA.
Prokaryotic Gene Regulation
Transcription is regulated differently in prokaryotes and eukaryotes. In general, prokaryotic regulation is simpler than eukaryotic regulation.
The Role of Operons
Regulation of transcription in prokaryotes typically involves operons. An operon is a region of DNA that consists of one or more genes that encode the proteins needed for a specific function. The operon also includes a promoter and an operator. The operator is a region of the operon where regulatory proteins bind. It is located near the promoter and helps regulate transcription of the operon genes.
The Lac Operon
A well-known example of operon regulation involves the lac operon in E. coli bacteria (see Figure below and the video at the link below). The lac operon consists of a promoter, an operator, and three genes that encode the enzymes needed to digest lactose, the sugar found in milk. The lac operon is regulated by lactose in the environment.
- When lactose is absent, a repressor protein binds to the operator. The protein blocks the binding of RNA polymerase to the promoter. As a result, the lac genes are not expressed.
- When lactose is present, the repressor protein does not bind to the operator. This allows RNA polymerase to bind to the promoter and begin transcription. As a result, the lac genes are expressed, and lactose is digested.
Why might it be beneficial to express genes only when they are needed? (Hint: synthesizing proteins requires energy and materials.)

Eukaryotic Gene Regulation
In eukaryotic cells, the start of transcription is one of the most complicated parts of gene regulation. There may be many regulatory proteins and regulatory elements involved. Regulation may also involve enhancers. Enhancers are distant regions of DNA that can loop back to interact with a gene’s promoter.
The TATA Box
Different types of cells have unique patterns of regulatory elements that result in only the necessary genes being transcribed. That’s why a skin cell and nerve cell, for example, are so different from each other. However, some patterns of regulatory elements are common to all genes, regardless of the cells in which they occur. An example is the TATA box. This is a regulatory element that is part of the promoter of most eukaryotic genes. A number of regulatory proteins bind to the TATA box, forming a multi-protein complex. It is only when all of the appropriate proteins are bound to the TATA box that RNA polymerase recognizes the complex and binds to the promoter. Once RNA polymerase binds, transcription begins.
Regulation During Development
The regulation of gene expression is extremely important during the development of an organism. Regulatory proteins must turn on certain genes in particular cells at just the right time so the organism develops normal organs and organ systems. Homeobox genes are an example of genes that regulate development. They code for regulatory proteins that switch on whole series of major developmental genes. In insects, homeobox genes called hox genes ensure that body parts such as limbs develop in the correct place. Figure below shows how a mutation in a hox gene can affect an insect’s development.

Gene Expression and Cancer
The mutations that cause cancer generally occur in two types of regulatory genes: tumor-suppressor genes and proto-oncogenes (see Figure below). These genes produce regulatory proteins that control the cell cycle. When the genes mutate, cells with mutations divide rapidly and without limits.

TED Ed: The Cancer Gene We All Have:
TED Ed: How does cancer spread through the body?
Lesson Summary
- Gene transcription is controlled by regulatory proteins that bind to regulatory elements on DNA. The proteins usually either activate or repress transcription.
- Regulation of transcription in prokaryotes typically involves an operon, such as the lac operon in E. coli. The lac operon is regulated by proteins that behave differently depending on whether lactose is present.
- Regulation of transcription in eukaryotes is generally more complex. It involves unique regulatory elements in different cells as well as common regulatory elements such as the TATA box. Regulation is especially important during development. It may involve regulatory genes such as homeobox genes that switch other regulatory genes on or off. Mutations in regulatory genes that normally control the cell cycle cause cancer.
Lesson Review Questions
Recall
1. What is gene expression?
2. Describe how regulatory proteins regulate gene expression.
3. Identify the TATA box and its function in transcription.
4. What is a homeobox gene?
Apply Concepts
5. Draw a diagram to show how the lac operon is regulated.
6. Sketch how an insect with a mutated hox gene might look. Explain your sketch.
Think Critically
7. Why is gene regulation especially important during development?
Points to Consider
Scientists know more about human chromosomes and genes than they know about the genetic material of most other species. In fact, scientists have identified all of the approximately 20,000-25,000 genes in human DNA.
- What do you know about human chromosomes and genes? For example, do you know how many chromosomes humans normally have?
- Do you know how human characteristics are inherited? Can you identify characteristics that are controlled by a single gene?
Previous: Mutation
Next: Human Genetics and Biotechnology

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I liked drawing my insect with the hox gene. I learned that everyone has cancer cell.
Thanks for leaving a comment! 🙂 I’m glad you’re enjoying and learning from the program!
Thanks for leaving a comment! 🙂 I’m glad you’re enjoying and learning from the program!
Please fix the above to say you’re, not your. The Grammar Elves will thank you. Also, is the word “of” needed here? “… gene that codes of regulatory proteins”
We all need a good editor, because after we work on something long enough we can’t see it!
Thanks!! Your comments are much appreciated. Do you mind sharing which sentence needs “your” changed to “you’re”?
It is in the comment previous to mine.
“E. colibacteria” needs a space.
“E. colibacteria” needs a space.
I am only seeing one fruitfly in the photo.
I am only seeing one fruitfly in the photo.
The last two videos are unavailable. 🙁
I just checked and they are working here. You may want to check a couple of things to see if either of these is keeping you from seeing them: 1. VPN may be interfering (if you have that). 2. Check and see if you are trying to access the videos with an age restricted account. Sometimes that is the cause for students not seeing videos. If either of those things is not contributing, try refreshing your browser or try a different browser.
Please don’t be shy in posting if you run into any others that aren’t working! We are always happy to double check!
It works for me.
the last two videos of this chapter were not available for me to watch.
I just checked and they are working for me. 🙂 They may not be showing up for you if you have a restricted YouTube account or if there is a browser issue and it’s not showing the embedded videos for some reason. Sometimes VPNs can also make it so embedded videos don’t show up. Try the following direct links:
https://youtu.be/pOyKFgGKmHE?si=TnX3W7f7mstmDbcv
and
https://youtu.be/OcigJn8UJNQ?si=4gRqHTI2opjVsVLZ
Please don’t be shy if you run into any other issues!
The last two videos are reading as unavailable.
How does cancer spread through the body? – Ivan Seah Yu Jun
and
The cancer gene we all have – Michael Windelspecht
are both working.
They may not be showing up for you if you have a restricted YouTube account or if there is a browser issue and it’s not showing the embedded videos for some reason. Please make sure you are logged into YouTube on a non-age-restricted account.
In addition some security software and parental oversight software like Net Nanny can cause you to not be able to see some videos.
It is our understanding that YouTube has changed how they handle videos that when they were uploaded were not specifically listed as being okay for kids by the creator. We believe that YouTube now blocks children’s YouTube accounts from things not specifically made for children. Adult or non-age-restricted accounts likely do not have such restrictions.
The Cancer videos are quite interesting, I learned a lot from them, thanks!
Thanks for the feedback! I’m so glad you liked the videos!